10 Best ACH Payment Processing Companies in 2025

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Choosing the right ACH payment processing company is essential for businesses that handle frequent bank-to-bank transactions, subscriptions, or recurring billing. Automated Clearing House (ACH) payments offer a secure, cost-effective way to move money electronically without relying on paper checks or high credit card fees. 

The best ACH processors help businesses streamline payment collection, reduce processing costs, and ensure reliable compliance with banking standards. From small startups to large enterprises, these providers make it easier to handle direct debits, vendor payments, and payroll deposits with efficiency and accuracy. With so many options, selecting the right partner can significantly impact your cash flow.

In this blog, we will take a look at 10 Best ACH Payment Processing Companies.

What are ACH Processing Services? 

ACH (Automated Clearing House) processing services enable businesses and individuals to transfer funds electronically between bank accounts within the United States. These services facilitate direct payments, such as payroll, vendor payments, subscriptions, and customer billing, without relying on paper checks or credit card networks. 

ACH transactions are typically batch-processed and settled within one to three business days, offering a cost-effective and secure method for handling both one-time and recurring payments. Common examples include direct deposits, bill payments, and e-checks. 

ACH processing is governed by NACHA (National Automated Clearing House Association), ensuring standardised and regulated transactions. These services are widely used by businesses of all sizes to streamline cash flow, reduce transaction fees, and improve payment automation.

How to Pick the Ideal ACH Payment Processor

  • Assess Business Needs: Determine if you need one-time payments, recurring billing, or mass payouts.
  • Pricing Structure: Compare transaction fees, monthly costs, and any caps or hidden charges.
  • Integration Options: Ensure compatibility with your accounting software, website, or CRM tools.
  • Ease of Use: Look for intuitive dashboards, automation features, and minimal technical setup.
  • Security & Compliance: Choose a provider compliant with NACHA rules and offering encryption, fraud protection, and secure bank verification.
  • Payout Speed: Check ACH processing times-some offer same-day deposits.
  • Scalability: Make sure it supports your growth, with options to scale up features or volume.
  • Customer Support: Reliable support can be crucial for resolving payment issues quickly.

List of 10 Best ACH Payment Processing Companies

1. Stripe ACH

ACH Payment Processing Company - Stripe ACH

Stripe is a leading online payment processor that facilitates online payments including ACH payment solutions such as ACH direct debit for companies in the United States. Stripe is a developer-friendly API that is ideal to integrate into any application and allows developers to automate payments and invoices easily. 

The ACH system that Stripe uses facilitates recurring billing, identity verification as well as fraud detection. It is highly scalable and can be integrated with major platforms, CRM, accounting software for e-commerce, and other accounting systems as well.

Stripe uses a 0.8 percent per ACH transaction fee (a maximum of 5), which is very affordable even when transferring large sums of money. It is broadly used in the SaaS, e-commerce, and B2B worlds, with great documentation and developer support to make the onboarding process and integration easier.

Website: https://stripe.com

Pros:

  • Developer-friendly RESTful APIs
  • Scalable for startups to enterprises
  • Seamless integration with web apps
  • Built-in fraud prevention tools
  • Supports recurring billing and invoicing
  • Excellent documentation and support

Cons:

  • Requires technical setup
  • ACH verification can delay onboarding
  • No in-person payments support
  • Transaction failures incur $4–15 fees

2. GoCardless

ACH Payment Processing Company - GoCardless

GoCardless is a dedicated payment processor that specialises in bank-to-bank payments such as ACH in the U.S. It is particularly good at managing recurring payments and subscription payments, so it fits well with SaaS and service-based businesses seeking reliable ACH payment solutions. As a strong choice for SaaS subscription management software, GoCardless simplifies payment handling for companies with recurring billing models.

GoCardless makes it easy to manage the cash flow with clever retry logic, automation of payment collections, and ability to integrate into key platforms including Xero, QuickBooks, and Salesforce. The competitive fees are at 0.5% + 0.05 USD per transaction (limited to the maximum of 5). 

GoCardless can also be used to receive international payments through bank debit, which means that it is a worldwide solution to businesses focusing on core concepts of cost-efficiency, automation, and billing.

Website: https://gocardless.com

Pros:

  • Built for recurring billing
  • Low transaction fees
  • Smart payment retry logic
  • Global bank debit support
  • Easy integration with Xero, QuickBooks
  • Transparent, capped pricing model

Cons:

  • Limited one-time payment flexibility
  • Not ideal for physical retail
  • Slower deposit times than cards
  • Lacks in-person POS support

3. Bill.com

ACH Payment Processing Company - Bill.com

Bill.com is a payments platform designed to help businesses automate accounts payable and receivable that provide ACH functionalities. Customised to fit B2B payments, it assists businesses to streamline and automate bill payments, invoice management, as well as approvals. 

It makes it possible to link to accounting systems such as NetSuite, Xero, QuickBooks, and others. Bill.com costs 45 per month on basic plans and provides ACH transfer with an audit trail, approaching payment schedule, and document organization. 

It is suitable to finance teams who are interested in minimising paperwork and have a better understanding of business cash flows.

Website: https://www.bill.com

Pros:

  • Full accounts payable automation
  • Two-way sync with accounting tools
  • Strong audit trails and controls
  • Easy scheduling of vendor payments
  • Secure cloud-based platform
  • Reduces manual invoice work

Cons:

  • High monthly base cost
  • ACH only available in the U.S.
  • Interface learning curve for beginners
  • Limited customisation for small businesses

4. PaySimple

ACH Payment Processing Company - PaySimple

PaySimple is a comprehensive payment system provider to service-based small businesses, providing processing of both ACH and credit cards, Invoicing and appointment scheduling services. 

It offers ACH services to businesses to enable them to receive recurring or one-time charges through bank transfers, where forms can be customized and processed safely. It is CRM-friendly and integrates well with CRM software for small businesses, including QuickBooks—a feature that makes it excellent when dealing with customer management and financial reconciliation.

The billing starts at 79.95 /month with a 1.00 %+0.30 ACH transaction fee. PaySimple is designed with a user-friendly interface and the option to access it on a mobile device making it a favorite among consultants, wellness providers, and other professionals.

Website: https://paysimple.com

Pros:

  • All-in-one payment + CRM suite
  • Simple recurring ACH billing
  • Custom payment forms
  • QuickBooks integration
  • Branded mobile checkout options
  • Text/email payment links supported

Cons:

  • Higher base monthly cost
  • Not suited for e-commerce sites
  • ACH funding may take 2–3 days
  • Limited international capabilities

5. Authorize.Net ACH

ACH Payment Processing Company - Authorize.Net ACH

One of the most reputable e-commerce payment gateways, Authorize.Net is a Visa subsidiary that accepts credit card and ACH/eCheck payments. It offers ACH payment solutions ideal for merchants requiring high levels of fraud protection, periodic billing, and customizable application program interfaces.

Corporates can receive payment in online forms, virtual terminals, or e-commerce integrations. The monthly charge accompanying the pricing is 25 dollars and 0.75 percent on transportation through ACH. 

More security with tokenization and QuickBooks-security integration are also available. Its decades of experience in the industry make it a solid business option still convenient to large-volume traders and businesses needing its low-volume stability and dependability.

Website: https://www.authorize.net

Pros:

  • Trusted Visa-owned gateway
  • Multi-payment support (ACH, cards)
  • Customisable fraud prevention tools
  • API and hosted form options
  • Supports batch processing
  • QuickBooks-compatible

Cons:

  • Monthly fee required
  • Extra charges for add-ons
  • Interface feels dated
  • Limited modern integrations

6. Dwolla

ACH Payment Processing Company - Dwolla

Businesses utilize Dwolla, a white-label ACH payment application programming interface (API) service, to develop their own unique payment streams. It provides same-day ACH, account verification and real time webhooks. 

Dwolla is developer-friendly, offering flexible APIs and strong documentation to power fintech applications, payroll and B2B platforms. The pricing is customised according to business requirements where plans are available to support small companies up to enterprise level customers. 

Automation, scalability, and branding are the core concepts that make Dwolla a favorite amongst businesses that seek to integrate payments into their respective interfaces, but without having to relinquish control over the end user experience.

Website: https://www.dwolla.com

Pros:

  • Customisable white-label API
  • Supports same-day ACH
  • Scalable for enterprise and startups
  • Real-time webhooks
  • Secure bank verification tools
  • Developer-first focus

Cons:

  • Requires technical integration
  • No built-in invoicing UI
  • No card processing included
  • Pricing not publicly listed

7. Helcim

ACH Payment Processing Company - Helcim

Helcim is a transparent and low-fees payment processing application that has ACH bank payments without monthly fees. It is especially accommodating to small and mid-sized companies offering powerful options in invoices and CRM alongwith stock management. 

It also has an all-in-one platform, which encompasses ACH processing, fast deposit, and convenient customer management. Helcim also supports credit card transactions using interchange-plus fees. 

The business highlights authenticity and low prices, without any secret fees or commitments. It is a good option when companies are seeking an integrated payment system at the affordable price point and a scalable system.

Website: https://www.helcim.com

Pros:

  • No monthly or hidden fees
  • Built-in ACH and card support
  • Includes invoicing and CRM
  • Transparent interchange-plus pricing
  • Quick and easy onboarding
  • Free virtual terminal and POS

Cons:

  • Not optimised for high-risk industries
  • ACH verification adds setup time
  • Some ACH features still maturing
  • No same-day ACH support yet

8. Square ACH

ACH Payment Processing Company - Square ACH

Best known as a provider of POS solutions, Square offers ACH bank transfer via Square Invoices. With a simple link, businesses can receive ACH payments without the need for hardware. As one of the notable ACH payment processing companies, Square stands out for its simplicity and ease of use.

Square also reports its fees at a flat 1 percent on ACH payments, so it is best suited to low-volume or occasional ACH users as there are no monthly charges. It is interconnected across the entire Square ecosystem, which consists of customer management tools, reporting, and scheduling. 

Square is ideal when freelancing, small retail, and service business require flexible & mobile friendly payment processes. It is quick to use and easy to get started because of its straightforward layout and flat fees.

Website: https://squareup.com

Pros:

  • No monthly subscription fee
  • Easy invoice-based ACH payment
  • Instant onboarding for SMBs
  • Integrates with full Square suite
  • Intuitive interface for beginners
  • Mobile and desktop access

Cons:

  • 1% fee higher than some rivals
  • ACH limited to invoices only
  • Not for high-volume ACH needs
  • Fewer options for enterprise users

9. QuickBooks Money (ACH)

ACH Payment Processing Company - QuickBooks Money (ACH)

QuickBooks Money (formerly QuickBooks Payments) offers built-in ACH payment functionality for users of QuickBooks Online. As one of the leading ACH payment solutions, it charges a 1% fee (max $10 per transaction) and allows small businesses to send and receive ACH transfers efficiently. 

Businesses can invoice clients and accept payments directly into their bank account, with same-day deposit options available. As part of the QuickBooks ecosystem, it ensures seamless bookkeeping and automatic transaction syncing. 

It’s particularly useful for freelancers, contractors, and SMBs already using QuickBooks for accounting and wanting to streamline cash flow.

Website: https://quickbooks.intuit.com/in/

Pros:

  • Built into QuickBooks ecosystem
  • Auto-sync with bookkeeping
  • Same-day deposit options
  • Easy invoicing with ACH
  • Simple, intuitive UI
  • Ideal for freelancers and SMBs

Cons:

  • Only works with QuickBooks Online
  • No standalone ACH option
  • Limited customisation outside QuickBooks
  • Cannot handle complex payment flows

10. Melio

ACH Payment Processing Company - Melio

Melio is a free B2B payment platform that allows small businesses to send ACH payments without transaction fees. Designed for ease of use, it supports scheduling, vendor management, and payment tracking. 

Businesses can pay bills via bank transfer or card, even if the recipient only accepts checks. Melio integrates with QuickBooks and other accounting tools to simplify reconciliation. 

Zero-cost ACH transfers are its main selling point, drawing in budget-conscious companies searching for effective payment processing. It’s ideal for freelancers, startups, and service-based businesses with simple AP workflows.

Website: https://meliopayments.com/

Pros:

  • 100% free ACH payments
  • Easy invoice and bill payments
  • Supports card-to-check vendor payments
  • No software installation needed
  • Great for small teams
  • QuickBooks integration

Cons:

  • ACH limited to business payments
  • No same-day ACH support
  • Minimal reporting features
  • Lacks recurring billing features

Ending Thoughts

Businesses can handle transactions directly between banks via ACH payment processing, which is safe, effective, and economical. Whether you’re a small startup or a large enterprise, choosing the right ACH payment processing companies can streamline operations, reduce payment delays, and cut transaction costs. With features like recurring billing, accounting integration, and fraud protection, the best providers help automate financial workflows and improve cash flow management. 

It’s crucial to take into account aspects like cost, support, scalability, and usability when choosing a processor. By aligning your choice with your specific business needs and growth plans, you can ensure seamless, reliable payments that enhance both customer satisfaction and operational efficiency. ACH processing is truly a modern solution for digital-era finance.

FAQs

1. Why Should a Business Use an ACH Payment Processor?

Using an ACH processor reduces transaction fees, automates recurring payments, improves cash flow, and offers a secure way to handle large or frequent payments.

2. Are ACH Payments Secure for Businesses and Customers?

Yes, ACH payments follow strict banking and compliance standards, offering encryption and fraud protection for both businesses and their customers.

3. How Long do ACH Payments Take to Process?

Though some contemporary processors now offer same-day ACH transfers for quicker transactions, ACH payments normally settle in one to three business days.

4. Can Small Businesses Use ACH Payment Processors?

Absolutely! Many ACH providers offer flexible plans suitable for startups, nonprofits, freelancers, and small businesses with predictable or recurring billing needs.

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